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Research Articles

2017

Ricardo G.F., Jones R.J., Nordborg M, Negri A.P. (2017) Settlement patterns of the coral Acropora millepora on sediment-laden surfaces. Science of The Total Environment doi.org/10.1016/j.scitotenv.2017.07.153

Pineda MC, Strehlow B, Sternel M, Duckworth A, Jones R, Webster N.S. (2017) Effect of suspended sediments on the sponge holobiont with implications for dredging management. Scientific Reports. doi:10.1038/s41598-017-05243-x

Pineda MC, Strehlow B, Sternel M, Duckworth A, den Haan J, Jones R, Webster N.S. (2017) Effects of sediment smothering on the sponge holobiont with implications for dredging management Scientific Reports 7, Article number: 5156 doi:10.1038/s41598-017-05243-x

Pineda MC, Strehlow B, Kamp J, Duckworth A, Jones R, Webster N.S. (2017) Effects of combined dredging-related stressors on sponges: a laboratory approach using realistic scenarios Scientific Reports doi:10.1038/s41598-017-05251-x

Munro J, Pearce J, Brown G, Kobryn H, Moore S.A. (2017) Identifying ‘public values’ for marine and coastal planning: Are residents and non-residents really so different? Ocean & Coastal Management 148, 9-21 https://doi.org/10.1016/j.ocecoaman.2017.07.016

Munro J, Kobryn H, Palmer D, Bayley S, and Moore S. A. (2017). Charting the coast: spatial planning for tourism using public participation GIS. Current Issues in Tourism doi.org/10.1080/13683500.2017.1346589

Wahab M.A.A., Fromont J, Gomez O, Fisher R, Jones R. (2017) Comparisons of benthic filter feeder communities before and after a large-scale capital dredging program Marine Pollution Bulletin doi.org/10.1016/j.marpolbul.2017.06.041

Fisher R, Walshe T, Bessell-Browne P, Jones R. (2017) Accounting for environmental uncertainty in the management of dredging impacts using probabilistic dose–response relationships and thresholds. J Appl Ecol. doi.org/10.1111/1365-2664.12936

Bessell-Browne P, Negri A.P., Fisher R, Clode P.L., Jones R, (2017) Cumulative impacts: thermally bleached corals have reduced capacity to clear deposited sediment Scientific Reports doi:10.1038/s41598-017-02810-0

Zhang N, Feng M, Hendon HH, Hobday AJ, Zinke J. (2017) Opposite polarities of ENSO drive distinct patterns of coral bleaching potentials in the southeast Indian Ocean. Scientific Reports doi:10.1038/s41598-017-02688-y

Moore, S.A., G. Brown, H. Kobryn and J. Strickland-Munro. 2017. Identifying conflict potential in a coastal and marine environment using participatory mapping. Journal of Environmental Management 197: 706-718. doi:http://doi.org/10.1016/j.jenvman.2016.12.026

Fraser MW, Short J, Kendrick G, et al. Effects of dredging on critical ecological processes for marine invertebrates, seagrasses and macroalgae, and the potential for management with environmental windows using Western Australia as a case study Ecological Indicators http://dx.doi.org/10.1016/j.ecolind.2017.03.026
For a copy of the reprint contact the author: matthew.fraser@uwa.edu.au
Click here for a copy of the post print (final draft post-refereeing)

Wenger AS, Harvey E, Wilson S, et al. A critical analysis of the direct effects of dredging on fish. Fish Fish. 2017;00:1–19. https://doi.org/10.1111/faf.1221/full

Bessell-Browne P, Fisher R, Duckworth A, Jones R, (2017) Mucous sheet production in Porites: an effective bioindicator of sediment related pressures Marine Pollution Bulletin 2017 http://dx.doi.org/10.1016/j.ecolind.2017.02.023

Bessell-Browne P, Negri A.P., Fisher R, Clode P.L., Duckworth A, Jones R, (2017) Impacts of turbidity on corals: The relative importance of light limitation and suspended sediments Ecological Indicators 2017 http://dx.doi.org/10.1016/j.marpolbul.2017.01.050

Pomeroy AW, Lowe RJ, Ghisalberti M, Storlazzi C, Symonds G, Roelvink D (2017), Sediment transport in the presence of large reef bottom roughness Journal of Geophysical Research 10.1002/2016JC011755

Brown G, Strickland-Munro J. Kobryn H and Moore SA . (2017). Mixed methods participatory GIS: An evaluation of the validity of qualitative and quantitative mapping methods. Applied Geography Applied Geography 79: 153-166. doi:http://dx.doi.org/10.1016/j.apgeog.2016.12.015.

2016

Cuttler MVW, Lowe RJ, Falter JL, Buscombe D (Dec 2016) Estimating the settling velocity of bioclastic sediment using common grain‐size analysis techniques Sedimentology 10.1111/sed.12338

Whinney J, Jones R, Duckworth A, Ridd P (Dec 2016) Continuous in situ monitoring of sediment deposition in shallow benthic environments Coral Reefs DOI 10.1007/s00338-016-1536-7

Adams MP, Hovey RK, Hipsey MR, Bruce LC, Ghisalberti M, Lowe RJ, Gruber RK, Ruiz-Montoya L, Maxwell PS, Callaghan DP, Kendrick GA, O'Brien KR (2016), Feedback between sediment and light for seagrass: Where is it important?. Limnology and Oceanography., 61: 1937–1955. doi:10.1002/lno.10319

Lowe RJ and Falter JL (2015) Oceanic Forcing of Coral Reefs Annual Review of Marine Science DOI: 10.1146/annurev-marine-010814-015834

Pomeroy AWM, Lowe RJ, Ghisalberti M, Storlazzi CD, Cuttler M, Symonds G (2015) Mechanics of sediment suspension and transport within a fringing reef. Coastal Sediments 2015: DOI: http://dx.doi.org/10.1142/9789814689977_0086

Pineda MC, Strehlow​ B.W., Duckworth A, Doyle J, Jones R, Webster N.S. Effects of light attenuation on the sponge holobiont- implications for dredging management Scientific Reports (2016) doi:10.1038/srep39038

Strehlow​ B.W., Jorgensen D, Webster N.S., Pineda MC, Duckworth A. Using a thermistor flowmeter with attached video camera for monitoring sponge excurrent speed and oscular behaviour PeerJ (2016) Dec DOI: 10.7717/peerj.2761

Cvitanovica c, McDonald J, Hobday A.J., (2016) From science to action: Principles for undertaking environmental research that enables knowledge exchange and evidence-based decision-making Journal of Environmental Management 2016, 183(3), 864; doi.org/10.1016/j.jenvman.2016.09.038

Fromont J, Wahab M.A.A., Gomez O, Ekins M,  Grol M, Norman Ashby Hooper J. (2016) Patterns of Sponge Biodiversity in the Pilbara, Northwestern Australia Diversity 2016, 8(4), 21; doi: 10.3390/d8040021

Dorji P, Fearns P. A. (2016) Quantitative Comparison of Total Suspended Sediment Algorithms: A Case Study of the Last Decade for MODIS and Landsat-Based Sensors. Remote Sensing. 2016; 8(10):810 doi:10.3390/rs8100810

Dorji P, Fearns P, Broomhall M (2016) A Semi-Analytic Model for Estimating Total Suspended Sediment Concentration in Turbid Coastal Waters of Northern Western Australia Using MODIS-Aqua 250 m Data. Remote Sensing. 2016; 8(7):556 doi:10.3390/rs8070556

Ricardo G.F., Jones R.J., Clode P.L., Negri A.P. (2016) Mucous Secretion and Cilia Beating Defend Developing Coral Larvae from Suspended Sediments. PLoS ONE 11(9): e0162743. doi:10.1371/journal.pone.0162743

Solihuddin, T.,  Bufarale, G., Blakeway, D., O'Leary, M.J. (2016) Geomorphology and Late Holocene Accretion History of Adele Reef: a Northwest Australian Mid-Shelf Platform Reef, Geo-Marine Letters, 2016, 1–15. DOI: 10.1007/s00367-016-0465-3

Lowe R.J., Pivan X, Falter J, Symonds G, Gruber R (August 2016) Rising sea levels will reduce extreme temperature variations in tide-dominated reef habitats Science Advances, DOI: 10.1126/sciadv.1600825

Strickland-Munro J, Kobryn H, Brown G, Moore S (2016) Valuing The Wild, Remote And Beautiful: Using Public Participation Gis To Inform Tourism Planning In The Kimberley, Western Australia International Journal of Sustainable Development and Planning DOI: 10.2495/SDP-V11-N3-355-364

Strickland-Munro J, Kobryn H, Brown G, Moore S (July 2016) Marine spatial planning for the future: Using Public Participation GIS (PPGIS) to inform the human dimension for large marine parks Marine Policy DOI: 10.1016/j.marpol.2016.07.011

Pearce J, Strickland-Munro J, Moore S (June 2016) What fosters awe-inspiring experiences in nature-based tourism destinations?, Journal of Sustainable Tourism, DOI: 10.1080/09669582.2016.1213270

Bufarale G, Collins LB, O’Leary MJ, Stevens A, Kordi M, Solihuddin T (2016). Quaternary onset and evolution of Kimberley coral reefs (Northwest Australia) revealed by high-resolution seismic imaging. Journal of Continental Shelf Research, 123, 80–88 doi:10.1016/j.csr.2016.04.002

Kordi, M.N., and O’Leary, M. (2016). Geomorphic classification of reefs in the north western Australia Shelf. Regional Studies in Marine Science, DOI 10.1016/j.rsma.2016.05.012.

Kordi, M.N., and O’Leary, M. (2016) A Spatial Approach to Improve Coastal Bioregion Management of the North Western Australia. Ocean & Coastal Management, 127, 26-42 doi:10.1016/j.ocecoaman.2016.04.004

Gilmour J, Speed CW, Babcock R. (2016) Coral reproduction in Western Australia. PeerJ 4:e2010 https://doi.org/10.7717/peerj.2010

Pedersen, O., Colmer, T. D., Borum, J., Zavala-Perez, A. and Kendrick, G. A. (2016), Heat stress of two tropical seagrass species during low tides – impact on underwater net photosynthesis, dark respiration and diel in situ internal aeration. New Phytol, 210: 1207–1218. doi:10.1111/nph.13900

Keesing J, Strzelecki J, Stowar M, Wakeford M, Miller K, Gershwin L, Liu G (Feb 2016) Abundant box jellyfish, Chironex sp. (Cnidaria: Cubozoa: Chirodropidae), discovered at depths of over 50 m on western Australian coastal reefs Scientific Reports doi:10.1038/srep22290

Solihuddin T, O’Leary M, Blakeway D, Parnum I, Kordi M, Collins L (March 2016) Holocene reef evolution in a macrotidal setting: Buccaneer Archipelago, Kimberley Bioregion, Northwest Australia Coral Reefs DOI 10.1007/s00338-016-1424-1

Ricardo G, Jones, Negri A, Stocker R (Feb 2016) That sinking feeling: Suspended sediments can prevent the ascent of coral egg bundles. Scientific Reports doi:10.1038/srep21567

Lafratta A, Fromont J, Speare P, Schönberg C (Feb 2016) Coral bleaching in turbid waters of north-western Australia Marine and Freshwater Research doi.org/10.1071/MF15314

Morgan D, Wringer B, Allen M, Ebner B, Whitty J, Gleiss A, Beatty S (Jan 2016) What Is the Fate of Amputee Sawfish?  Fisheries Volume 41, Issue 2, 2016 DOI: 10.1080/03632415.2015.1125887

Brown A, Bejder L, Pollock K,Allen S (February 2016) Site-Specific Assessments of the Abundance of Three Inshore Dolphin Species to Inform Conservation and Management Frontiers in Marine Science http://dx.doi.org/10.3389/fmars.2016.00004

 

2015

Brown G, Strickland-Munro J, Kobryn H, Moore S (Dec 2015) Stakeholder analysis for marine conservation planning using public participation GIS Applied Geography doi:10.1016/j.apgeog.2015.12.004

G. Ricardo, R, Jones, P. Clode, A. Humanes, A. Negri (Dec 2015) Suspended sediments limit coral sperm availability Scientific Reports doi:10.1038/srep18084

R Jones, P. Bessell-Brownea, R. Fishera, W. Klonowskic, M. Slivkoffc (Dec 2015) Assessing the impacts of sediments from dredging on corals Marine Pollution Bulletin doi:10.1016/j.marpolbul.2015.10.049

Schoepf V, Stat M, Falter JL, McCulloch MT (December 2015) Limits to the thermal tolerance of corals adapted to a highly fluctuating, naturally extreme temperature environment. Nature Scientific Reports doi:10.1038/srep17639

R Fisher, C Stark, P Ridd, R Jones (Dec 2015) Spatial Patterns in Water Quality Changes during Dredging in Tropical Environments PLOS DOI: 10.1371/journal.pone.0143309

Brown A, Bejder L,Parra G, Cagnazzi D, Hunt T, Smith J, Allen S (November 2015) Sexual Dimorphism and Geographic Variation in Dorsal Fin Features of Australian Humpback Dolphins, Sousa sahulensis Advances in Marine Biology doi:10.1016/bs.amb.2015.08.002

Kordi M.N., Collins, L.B., O'Leary M, Stevens A (November 2015) ReefKIM: An integrated geodatabase for sustainable management of the Kimberley Reefs, North West Australia Ocean & Coastal Management doi:10.1016/j.ocecoaman.2015.11.004

Kordi M.N., Collins, L.B. and Stevens A. (2015). A Large Scale Geomorphological and Surficial Cover Map of Nearshore Reefs in the Kimberley Coast, WA. In Proceedings from Coast to Coast Conference 2014, Mandurah, Western Australia. ISBN-10: 0994357206 pp 15–20

Ming Feng, Jessica Benthuysen, Ningning Zhang and Dirk Slawinski (October 2015) Freshening anomalies in the Indonesian throughflow and impacts on the Leeuwin Current during 2010–2011 Research Letters DOI: 10.1002/2015GL065848

Yan Du, Yuhong Zhang, Ming Feng, Tianyu Wang, Ningning Zhang & Susan Wijffels Decadal trends of the upper ocean salinity in the tropical Indo-Pacific since mid-1990s Scientific Reports 5, Article number: 16050 (2015) doi:10.1038/srep16050

Jens Zinke, A. Hoell, J.M. Lough, M. Feng, A.J. Kuret, H. CLarke, V. Ricca, K. Rankenburg, & M.T. McCulloch (October 2015) Coral record of southeast Indian Ocean marine heatwaves with intensified Western Pacific temperature gradient, Nature Communications doi:10.1038/ncomms9562

C.H.L. Schönberg (Sept 2015) Happy relationships between marine sponges and sediments – a review and some observations from Australia Journal of the Marine Biological Association of the United Kingdom DOI: http://dx.doi.org/10.1017/S0025315415001411

R. Jones, R. Fisher, C. Stark, P. Ridd (October 2015) Temporal Patterns in Seawater Quality from Dredging in Tropical Environments PLOS DOI: 10.1371/journal.pone.0137112

R. Jones,G.F. Ricardo, A.P. Negri (2015) Effects of sediments on the reproductive cycle of corals. Marine Pollution Bulletin doi:10.1016/j.marpolbul.2015.08.021

Collins, L.B., O’Leary, M.J., Stevens, A. M., Bufarale, G., Kordi, M., Solihuddin, T, 2015. Geomorphic Patterns, internal architecture and Reef Growth in a macrotidal, high turbidity setting of coral reefs from the Kimberley Bioregion. Australian Journal of Maritime & Ocean Affairs, Volume 7, Issue 1, pp 12-22. (open access from Nov 2017)

S. S. Dandan , J. L. Falter, R. J. Lowe, M. T. McCulloch Resilience of coral calcification to extreme temperature variations in the Kimberley region, northwest Australia Coral Reefs ISSN: 0722-4028 (Print) 1432-0975 (Online) pp 1-13 First online: 09 August 2015 DOI 10.1007/s00338-015-1335-6

Strickland-Munro, J., Moore, S., Kobryn, H. and Palmer, D. (2015) Values and aspirations for coastal waters of the Kimberley: social values and participatory mapping using interviews. Technical Report. Kimberley Marine Research Program Node of the Western Australian Marine Science Institution. Western Australian Marine Science Institution, Perth, Western Australia.

Ryan J. Lowe, Arturo S. Leon, Graham Symonds, James L. Falter, and Renee Gruber The intertidal hydraulics of tide-dominated reef platforms Journal of Geophysical Research: Oceans Volume 120, Issue 7 July 2015 Pages 4845–4868 DOI: 10.1002/2015JC010701

Collins, L.B., O’Leary, M.J., Stevens, A. M., Bufarale, G., Kordi, M., Solihuddin, T, 2015. Geomorphic Patterns, internal architecture and Reef Growth in a macrotidal, high turbidity setting of coral reefs from the Kimberley Bioregion. Australian Journal of Maritime & Ocean Affairs, Volume 7, Issue 1, pp 12-22. DOI: 10.1080/18366503.2015.1021411

Jiangtao Xua, Ryan J. Lowe, Gregory N. Ivey, Nicole L. Jones and Richard Brinkman Observations of the shelf circulation dynamics along Ningaloo Reef, Western Australia during the austral spring and summer. Continental Shelf Research Volume 95, 1 March 2015, Pages 54–73 doi:10.1016/j.csr.2014.12.013

Ryan J. Lowe and James L. Falter Oceanic Forcing of Coral Reefs  Annual Review of Marine Science 2015. 7:43–66 doi: 10.1146/annurev-marine-010814-015834 view on the website

Ming Feng, Harry H. Hendon, Shang-Ping Xie4, Andrew G. Marshall, Andreas Schiller, Yu Kosaka, Nick Caputi and Alan Pearce 2015. Decadal increase in Ningaloo Niño since the late 1990s. Geophysical Research Letters, 42(1), doi: 10.1002/2014GL062509.

Z. T. Richards, M. J. O’Leary, The coralline algal cascades of Tallon Island (Jalan) fringing reef, NW Australia. Coral Reefs June 2015, Volume 34, Issue 2, pp 595-595 First online: 04 February 2015 doi: 10.1007/s00338-015-1262-6

Morgan D, Allen M, Ebner B, Whitty J, Beatty S (February 2015) Discovery of a pupping site and nursery for critically endangered green sawfish Pristis zijsron Journal of Fish Biology doi:10.1111/jfb.12668

Giada Bufarale · Lindsay B. Collins Stratigraphic architecture and evolution of a barrier seagrass bank in the mid-late Holocene, Shark Bay, Australia. Marine Geology 11/2014; 359. DOI:10.1016/j.margeo.2014.11.010

Tubagus Solihuddin, Lindsay.B. Collins, David Blakeway, Michael J. O' Leary (2015) Holocene coral reef growth and sea level in a macrotidal, high turbidity setting: Cockatoo Island, Kimberley Bioregion, northwest Australia. Marine Geology Volume 359, 1 January 2015, Pages 50–60 doi:10.1016/j.margeo.2014.11.011

M.C. Pineda, A Duckworth, N Webster (Jan 2015) Appearance matters: sedimentation effects on different sponge morphologies  Journal of the Marine Biological Association of the United Kingdom DOI: http://dx.doi.org/10.1017/S0025315414001787

 

2014

C.H.L. Schönberg (Dec 2014) Self-cleaning surfaces in sponges   Marine Biodiversity DOI: 10.1007/s12526-014-0302-8

T. Tucker et al 1.2.2 Turtles The WAMSI Marine Turtle Project in the Kimberley Conference Proceedings Page 79  Turtle Symposium 2014  

N.L. Jones, N.L. Patten, D.L. Krikke, R.J. Lowe, A.M. Waite, G.N. Ivey Biophysical characteristics of a morphologically-complex macrotidal tropical coastal system during a dry season Estuarine, Coastal and Shelf Science Volume 149, 5 August 2014, Pages 96–108 doi:10.1016/j.ecss.2014.07.018

Haigh ID, MacPherson LR, Mason MS, Wijeratne EMS, Pattiaratchi CB, Crompton RP & George S. 2014. Estimating present day extreme water level exceedance probabilities around the coastline of Australia: tropical cyclone-induced storm surges. Climate Dynamics, 42(1–2), 139–157. http://link.springer.com/article/10.1007%2Fs00382-012-1653-0

Haigh ID, Wahl T, Rohling EJ, Price RM, Pattiaratchi CB, Calafat FM & Dangendorf S. 2014. Timescales for detecting a significant acceleration in sea level rise. Nature Communications, 5(3635), doi: 10.1038/ncomms4635. http://www.nature.com/ncomms/2014/140414/ncomms4635/full/ncomms4635.html

Haigh ID, Wijeratne EMS, MacPherson LR, Pattiaratchi CB, Mason MS, Crompton RP & George S. 2014. Estimating present day extreme water level exceedance probabilities around the coastline of Australia: tides, extra-tropical storm surges and mean sea level. Climate Dynamics, 42(1–2), 121–138. http://link.springer.com/article/10.1007%2Fs00382-012-1652-1

Michael C. Double, Virginia Andrews-Goff, K. Curt S. Jenner, Micheline-Nicole Jenner, Sarah M. Laverick, Trevor A. Branch, Nicholas J. Gales Published: April 09, (2014) Migratory Movements of Pygmy Blue Whales (Balaenoptera musculus brevicauda) between Australia and Indonesia as Revealed by Satellite Telemetry http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0093578

 

2013

Cerutti-Pereyra F., Thums M., Austin C. M., Bradshaw C. J. A., Stevens J. D., Babcock R. C., Pillans R. D., Meekan M. G. (2013) Restricted movements of juvenile rays in the lagoon of Ningaloo Reef, Western Australia – evidence for the existence of a nursery. http://link.springer.com/article/10.1007/s10641-013-0158-y#

Fairclough D.V., Edmonds J.S., Jackson G., Lenanton R.C.J., Kemp J., Molony B.W., Keay I.S., Crisafulli B.M., Wakefield C.B. (2013). A comparison of the stock structures of two exploited demersal teleosts, employing complementary methods of otolith element analysis http://www.sciencedirect.com/science/article/pii/S0022098112003851

Gallop SL, Bosserelle C, Eliot I & Pattiaratchi CB. 2013. The influence of coastal reefs on spatial variability in seasonal sand fluxes. Marine Geology, 344, 132–143. http://www.sciencedirect.com/science/article/pii/S0025322713001655

Johansson C. L., van de Leemput I. A., Depczynski M., Hoey A. S., Bellwood D. R. (2013) Key herbivores reveal limited functional redundancy on inshore coral reefs. http://link.springer.com/article/10.1007%2Fs00338-013-1044-y#

Keesing J.K. and T.R. Irvine (2013). Aspects of the biology of an abundant spatangoid urchin, Breynia desori in the Kimberley region of north-western Australia. p165-174, in: Johnson, C.R. (ed.) Echinoderms in a Changing World. CRC Press/Balkema, The Netherlands. http://www.crcnetbase.com/doi/abs/10.1201/b13769-23

Keesing, J.K. (2013). Ecology of Heliocidaris erythrogramma. In: J.M. Lawrence (ed.) Edible Sea Urchins: Biology and Ecology. (Third Edition) Developments in Aquaculture and Fisheries Science 38: 369-379. Elsevier. http://www.sciencedirect.com/science/article/pii/B9780123964915000253

Keesing, J.K., Strzelecki, J., Fromont, J. and Thomson, D. (2013) Sponges as important sources of nitrate on an oligotrophic continental shelf. Limnology and Oceanography 58 (6), 1947-1958.

Li, B., Keesing, J.K., Lourey, M. and McLaughlin (2013). Feeding and bioturbation effects of the sand dollar Peronella lesueuri (L. Agassiz, 1841) (Echinodermata) on microphytobenthos and sediment fluxes. Marine and Freshwater Behaviour and Physiology 46, No. 6, 431–446, http://dx.doi.org/10.1080/10236244.2013.850834

Metcalf, S.J., Dambacher, J.M., Rogers, P., Hall, N., Loneragan, N. and Gaughan, D.J. (2013).  Identifying key dynamics and ideal governance structures for successful ecological management. http://www.sciencedirect.com/science/article/pii/S146290111300141X

Metcalf, S.J., Dambacher, J.M., Rogers, P., Hall, N., Loneragan, N. and Gaughan, D.J. (2013).  Identifying key dynamics and ideal governance structures for successful ecological management of the Peel Harvey Estuary. http://www.sciencedirect.com/science/article/pii/S146290111300141X

Yeo, S., Keesing, J.K. and van Keulen, M. (2013). Seasonal and diel variation in movement rhythms of sand dollar, Peronella lesueuri (Valenciennes, 1841), in Cockburn Sound, Western Australia. Marine Biology 160(2): 277-284, DOI 10.1007/s00227-012-2086-3. http://link.springer.com/article/10.1007%2Fs00227-012-2086-3

 

2012

Adriana Vergés, Scott Bennett, David R. Bellwood (2102) Diversity among Macroalgae-Consuming Fishes on Coral Reefs: A Transcontinental Comparison. http://www.plosone.org/article/info:doi/10.1371/journal.pone.0045543

Berry O., England P., Fairclough D., Jackson G. and Greenwood J.. (2012) Microsatellite DNA analysis and hydrodynamic modelling reveal the extent of larval transport and gene flow between management zones in an exploited marine fish (Glaucosoma hebraicum) Fisheries Oceanography. DOI: 10.1111/j.1365-2419.2012.00623.x, Volume 21, Issue 4, pages 243–254, http://onlinelibrary.wiley.com/doi/10.1111/j.1365-2419.2012.00623.x/abstract

Bosserelle C, Pattiaratchi CB & Haigh ID. 2012. Inter-annual variability and longer-term changes in the wave climate of Western Australia between 1970 and 2009. Ocean Dynamics, 62(1), 63–76. http://link.springer.com/article/10.1007%2Fs10236-011-0487-3

Elizabeth A. Fulton, Fabio Boschetti, Miriana Sporcic, Tod Jones, L. Rich Little, Randall Gray, Roger Scott and Rebecca Gorton (2012) A multi-model approach to stakeholder engagement in complex environmental problems. http://www.per.marine.csiro.au/staff/Fabio.Boschetti/papers/MODSIM11_MultiModel.pdf

Elizabeth A. Fulton, Tod Jones, Fabio Boschetti, Kelly L. Chapman, L. Rich Little, Geoff Syme, Peta Dzidic, Rebecca Gorton, Miriana Sporcic, and William de la Mare (2012) Assessing the impact of stakeholder engagement in Management Strategy Evaluation. http://www.ijeme.org/paperInfo.aspx?PaperID=12021

Florencia Cerutti-Pereyra, Mark G. Meekan, Nu-Wei V. Wei, Owen O'Shea, Corey J. A. Bradshaw, Chris M. Austin (2012) Identification of Rays through DNA Barcoding: An Application for Ecologists. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0036479

Gallop SL, Bosserelle C, Eliot I & Pattiaratchi CB. 2012. The influence of limestone reefs on storm erosion and recovery of a perched beach. Continental Shelf Research, 47, 16–27. http://www.sciencedirect.com/science/article/pii/S0278434312002154

Gallop SL, Bosserelle C, Pattiaratchi CB & Eliot I. 2012. Storm-driven perched beach dynamics behind a natural low-crested structure. Proceedings of the eighth international conference on coastal and port engineering in developing countries (COPEDEC VIII), Department of Ocean Engineering, Indian Institute of Technology Madras, Chennai, 20–24 February, pp. 332–343. http://eprints.soton.ac.uk/349723/

Gallop SL, Bosserelle C, Pattiaratchi CB, Eliot I & Haigh ID. 2012. The influence of calcarenite limestone reefs on beach erosion and recovery, from seconds to years. In P Lynett & J McKee Smith (eds), Coastal engineering 2012: proceedings of the thirty-third international conference, American Society of Civil Engineers, Santander, 1–6 July. https://journals.tdl.org/icce/index.php/icce/article/view/6558

Gallop SL, Verspecht F & Pattiaratchi CB. 2012. Sea breezes drive currents on the inner continental shelf off southwest Western Australia. Ocean Dynamics, 62(4), 569–583. http://link.springer.com/article/10.1007%2Fs10236-011-0515-3

Hallett, C.S., Valesini, F.J., Clarke, K.R. (2012). A method for selecting health index metrics in the absence of independent measures of ecological condition. Ecological Indicators 19: 240-252.  http://www.sciencedirect.com/science/article/pii/S1470160X11002081

Herwig JN, Depczynski M, Roberts JD, Semmens JM, Gagliano M, et al. (2012). Using Age-Based Life History Data to Investigate the Life Cycle and Vulnerability of Octopus cyanea. PLoS ONE 7(8): e43679. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0043679

Johansson, CL; Bellwood, DR and Depczynski, M (2012) The importance of live coral for small-sized herbivorous reef fishes in physically challenging environments. Marine and Freshwater Research. 63(8): 672-679. http://www.publish.csiro.au/paper/MF12011.htm

Keesing, J.K., Usher, KM and Fromont, J.  (2012). First record of photosynthetic cyanobacterial symbionts from mesophotic temperate sponges. Marine and Freshwater Research 63, 403–408 http://www.publish.csiro.au/paper/MF11216.htm

Langlois, T. J., Harvey, E. S., Meeuwig, J. J. (2012) Strong direct and inconsistent indirect effects of fishing found using stereo-video: testing indicators from fisheries closures. Ecological Indicators 23: 524-534.  http://www.sciencedirect.com/science/article/pii/S1470160X12001999

Langlois, T. J., Van Niel, K. P., Meeuwig, J. J., Pearce, A., Radford, B. & Harvey, E. S. (2012) Consistent abundance distributions of marine fishes in an old, climatically buffered, infertile seascape. Global Ecology and Biogeography 21(9):886–897.  http://onlinelibrary.wiley.com/doi/10.1111/j.1466-8238.2011.00734.x/abstract

MacPherson LR, Haigh ID, Mason MS, Wijeratne EMS, Pattiaratchi CB & George S. 2012. Extreme water level exceedance probabilities around Australia. In P Lynett & J McKee Smith (eds), Coastal engineering 2012: proceedings of the thirty-third international conference, American Society of Civil Engineers, Santander, 1–6 July. http://eprints.qut.edu.au/73664/

Rousseaux CSG, Lowe R, Feng M, Waite AM, Thompson PA. (2012). The role of the Leeuwin Current and mixed layer depth on the autumn phytoplankton bloom off Ningaloo Reef, Western Australia. Continental Shelf Research (1):22–35. http://www.sciencedirect.com/science/article/pii/S027843431100330X

Schönberg, C and Fromont, J. (2012)  Sponge gardens of Ningaloo Reef (Carnarvon Shelf, Western Australia) are biodiversity hotspots. Hydrobiologia 687(1): 143-161. http://link.springer.com/article/10.1007%2Fs10750-011-0863-5#

Taebi S, Lowe RJ, Pattiaratchi CB, Ivey GN & Symonds G. 2012. A numerical study of the dynamics of the wave-driven circulation within a fringing reef system. Ocean Dynamics, 62(4), 585–602. http://link.springer.com/article/10.1007%2Fs10236-011-0514-4

Taebi S, Lowe RJ, Pattiaratchi CB, Ivey GN, Symonds G, Brinkman R. (2012). A numerical study of the dynamics of the wave-driven circulation within a fringing reef system, Ocean Dynamics 62(4):585-602. http://link.springer.com/article/10.1007%2Fs10236-011-0514-4#

Taebi S, Pattiaratchi, CB, Lowe R, Ivey G & Symonds G. 2012. Hydrodynamic response of a tropical coral reef to a rise in mean sea level. Proceedings of the eighth international conference on coastal and port engineering in developing countries (COPEDEC VIII), Department of Ocean Engineering, Indian Institute of Technology Madras, Chennai, 20–24 February, pp. 750–761. http://link.springer.com/article/10.1007%2Fs10236-014-0734-5

Wijeratne EMS, Pattiaratchi CB, Eliot M & Haigh ID. 2012. Tidal characteristics in Bass Strait, south-east Australia. Estuarine, Coastal and Shelf Science, 114, 156–165. http://www.sciencedirect.com/science/article/pii/S0272771412003472

Zhao, M., H. Hendon, O. Alves and Y. Yin (2012) Impact of Improved Dynamical Balance between Assimilated Temperature and Salinity on Coupled Model  Seasonal Forecasts http://journals.ametsoc.org/doi/pdf/10.1175/MWR-D-11-00341.1

Zhao, M., H. Hendon, O. Alves, Y. Yin and D. Anderson (2012). Impact of assimilating salinity on the simulated mean state and variability in a coupled seasonal forecast model. Monthly Weather Review. http://journals.ametsoc.org/doi/abs/10.1175/MWR-D-11-00341.1?af=R&

 

2011

Beger, M., R. Babcock, D. J. Booth, D. Bucher, S.A. Condie, B. Creese, C. Cvitanovic, S.J. Dalton, P. Harrison, A. Hoey, A. Jordan, J. Loder, H. Malcolm, S.W. Purcell, C.M. Roelfsema, P. Sachs, S.D.A. Smith, B. Sommer, R. Stuart-Smith, D. Thomson, C.C. Wallace, M. Zann and J.M. Pandolfi (2011). Research challenges to improve the management and conservation of subtropical reefs to tackle climate change threats. Ecological Management and Restoration Vol. 12: 7-10. http://onlinelibrary.wiley.com/doi/10.1111/j.1442-8903.2011.00573.x/abstract

Black, R, Brearley A, Johnson M, Prince J. 2011. Diversity, abundance and distribution of intertidal invertebrate species in the NMP. Final report submitted to WAMSI. 452pp. /sites/wamsi.org.au/files/Node%203.2.2b%20Diversity,%20abundance%20and%20distribution%20of%20intertidal%20invertebrate.pdf

Bosserelle C, Haigh ID, Pattiaratchi CB & Gallop S. 2011. Simulation of perched beach accretion using smoothed particle hydrodynamics. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://www.researchgate.net/publication/235223488_Simulation_of_perched_beach_accretion_using_smoothed_particle_hydrodynamics

Cai, W., P.V. Rensch, T. Cowan, and H.H. Hendon (2011). Teleconnection pathways for ENSO and the IOD and the mechanism for impacts on Australian rainfall. J. Climate, 24: 3910–3923.  http://journals.ametsoc.org/doi/abs/10.1175/2011JCLI4129.1

Cook, K. and M.A. Vanderklift (2011). Depletion of predatory fish by fishing in a temperate reef ecosystem leads to indirect effects on prey, but not to lower trophic levels. Marine Ecology Progress Series 432: 195-205. http://www.int-res.com/abstracts/meps/v432/p195-205/

Evans, R. and Molony, B. W. (2011) Pilot evaluation of the efficacy of electronic monitoring on a demersal gillnet vessel as an alternative to human observers. Fisheries Research Report No. 221. Department of Fisheries, Western Australia. 16 pp. http://www.fish.wa.gov.au/Documents/research_reports/frr221.pdf

Fairclough, D. V., Lenanton, R. C. J and Jackson, G. (2011)  Rapid and cost-effective assessment of connectivity among assemblages of baldchin groper Choerodon rubescens (Labridae), using laser ablation ICP-MS analysis of sagittal otoliths. Journal of Experimental Marine Biology and Ecology 403: 46–53.  http://www.sciencedirect.com/science/article/pii/S0022098111001638

Fearns, P.R.C., W. Klonowski, R.C. Babcock, P. England and J. Phillips (2011). Shallow water substrate mapping using hyperspectral remote sensing. Continental Shelf Research 31(12):1249-1259. http://www.sciencedirect.com/science/article/pii/S0278434311001324

Feng, M., C. Boning, Biastoch A, Behrens E., E. Weller E., and Masumoto Y. (2011), The reversal of the multi-decadal trends of the equatorial Pacific easterly winds, and the Indonesian Throughflow and Leeuwin Current transports. Geophys. Res. Lett., 38, L11604. http://onlinelibrary.wiley.com/doi/10.1029/2011GL047291/abstract

Fletcher, W.J., Shaw, J., Gaughan, D.J., Metcalf, S.J. (2011). Ecosystem Based Fisheries Management. Case Study of the West Coast Bioregion.  Fisheries Research Report No. 225. http://www.fish.wa.gov.au/Documents/research_reports/frr225.pdf

Gallop SL, Bosserelle C, Pattiaratchi CB & Eliot I. 2011. Form and function of natural and engineered perched beaches. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://search.informit.com.au/documentSummary;dn=678794438360112;res=IELENG

Gallop SL, Bosserelle C, Pattiaratchi CB & Eliot I. 2011. Hydrodynamic and morphological response of a perched beach during sea breeze activity. Proceedings of the eleventh international coastal symposium, Szczecin, Poland, 9–14 May, Journal of Coastal Research, special issue 64, pp. 75–79. http://www.researchgate.net/publication/231182667_Hydrodynamic_and_morphological_response_of_a_perched_beach_during_sea_breeze_activity

Gallop, S.L., Bosserelle, C., Pattiaratchi, C.B., Eliot, I., (2011). Hydrodynamic and morphological response of a perched beach during sea breeze. Proceedings of the 11th International Coastal Symposium ICS 2009, Szczecin, Poland. Journal of Coastal Research, Special Issue 64, pp. 75–79. http://www.researchgate.net/publication/231182667_Hydrodynamic_and_morphological_response_of_a_perched_beach_during_sea_breeze_activity

Gardner MJ, Chaplin JA, Shaw KM (2011) Development and characterisation of novel microsatellite loci for the baldchin groper (Choerodon rubescens) and cross-amplification in seven other labrid species. Conservation Genetics Resources, 3(3), 461 – 466. DOI: 10.1007/s12686-010-9379-y. http://www.springerlink.com/content/n4t1n55163332712/?MUD=MP

Haigh ID, Eliot M & Pattiaratchi CB. 2011. Global influences of the 18.6-year nodal cycle and 8.85-year cycle of lunar perigree on high tidal levels. Journal of Geophysical Research: Oceans, 116, C06025, doi: 10.1029/2010JC006645. http://onlinelibrary.wiley.com/doi/10.1029/2010JC006645/abstract

Haigh ID, Eliot M, Pattiaratchi CB & Wahl T. 2011. Regional changes in mean sea level around Western Australia between 1897 and 2008. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://search.informit.com.au/documentSummary;dn=708048203235486;res=IELENG

Hall, N and Wise, B (2011) Development of an ecosystem approach to the monitoring and management of Western Australian fisheries.  FRDC Project 2005/063.  Fisheries Research Report No. 215. http://www.fish.wa.gov.au/Documents/research_reports/frr215.pdf

Hartill B.W., Cryer M., Lyle J.M., Rees E.B., Ryan K.L., Steffe A.S., Taylor S.M., Laurie W., and Wise B.S. (2011). Scale- and Context-Dependent Selection of Recreational Harvest Estimation Methods: The Australasian Experience. http://www.tandfonline.com/doi/abs/10.1080/02755947.2012.661387#preview

Hartog, J., Hobday, J. A., Matear, R., and Feng, M. (2011). Habitat overlap between southern bluefin tuna and yellowfin tuna in the east coast longline fishery – implications for present and future spatial management. Deep-Sea Research II, 58:746-752. http://www.sciencedirect.com/science/article/pii/S0967064510002122

Hassler, C.S., J.R. Djajadikarta, M.A. Doblin, J.D. Everett and P.A. Thompson (2011). Characterisation of water masses and phytoplankton nutrient limitation in the East Australian Current separation zone during spring 2008. Deep-Sea Research II 58: 664-677. http://www.sciencedirect.com/science/article/pii/S0967064510002158

Keesing, J.K, Graham F., Irvine, T. and Crossing, R. (2011) Synchronous aggregated pseudocopulation of the sea star Archaster angulatus Muller and Troschel, 1842 (Echinodermata: Asteroidea) and its reproductive cycle in south-western Australia. Marine Biology 158:1163–1173 http://link.springer.com/article/10.1007%2Fs00227-011-1638-2

Keesing, J.K., Irvine, T.R., Alderslade, P., Clapin G., Fromont, J., Hosie, A., Huisman, J., Phillips, J., Naughton, K.M., Marsh, L.M., Slack-Smith, S. Thomson, D. and Watson, J. (2011). Marine benthic flora and fauna of Gourdon Bay and the Dampier Peninsula in the Kimberley region of north-western Australia. Journal of the Royal Society of Western Australia (Kimberley Special Issue)94: 285-301 (Kimberley Special issue). http://researchrepository.murdoch.edu.au/7714/

Lawrence, J.M., J.K. Keesing and T.R. Irvine (2011). Population characteristics and biology of two populations of Archaster angulatus (Echinodermata: Asteroidea) in different habitats off the central-western Australian coast. Journal of the Marine Biological Association UK  91(8): 1577-1585. http://journals.cambridge.org/action/displayAbstract?fromPage=online&aid=8419630

Little, LR, Thebaud, O, Boschetti, F, McDonald, AD, Marriott, R, Wise, B, Lenanton, R. 2011. An Evaluation of Management Strategies for Line Fishing in the Ningaloo Marine Park. Final report submitted to WAMSI, Node 3. Perth, WA. https://publications.csiro.au/rpr/pub?list=BRO&pid=csiro:EP106710&sb=RECENT&n=5&rpp=25&page=268&tr=189989&dr=all

Lozano-Montes, H.M., N.R. Loneragan, R.C. Babcock and K. Jackson (2011). Using trophic flows and ecosystem structure to model the effects of fishing in the Jurien Bay Marine Park, temperate Western Australia. Marine and Freshwater Research 62: 1-11. http://www.publish.csiro.au/paper/MF09154.htm

M. Zhao, G.M. Wang, H.H. Hendon, and O. Alves (2011). Impact of including surface currents on simulation of Indian Ocean variability with the POAMA coupled model. Climate Dyn., 36:1291-1302. http://link.springer.com/article/10.1007%2Fs00382-010-0823-1#

MacPherson LR, Haigh ID & Pattiaratchi CB. 2011. Coastal flooding in the Peel Harvey Estuary and the effects of mean sea level rise. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://www.researchgate.net/publication/235223493_Coastal_flooding_in_the_Peel_Harvey_Estuary_and_the_effects_of_mean_sea_level_rise

McGregor, F. (2011). Manta ray (Manta alfredi) visitation to Ningaloo Reef, WA - the importance of residence! In Proceedings of the Australian Marine Sciences Association 48th Annual Conference, Fremantle, WA. http://researchrepository.murdoch.edu.au/6669/

Metcalf, S. J., Pember, M. B. and Bellchambers, L. M. (2011) Identifying indicators of the effects of fishing using alternative models, uncertainty, and aggregation error. ICES Journal of Marine Science 68: 1417–1425. http://icesjms.oxfordjournals.org/content/68/7/1417.abstract

Ming Feng, Nick Caputi, James Penn, Dirk Slawinski, Simon de Lestang, Evan Weller, and Alan Pearce (2011) Ocean circulation stokes drift and connectivity of western rock lobster (Panulirus cygnus) population. http://www.nrcresearchpress.com/doi/abs/10.1139/f2011-065

Patten NL, Wyatt, ASJ, Lowe, RJ, Waite, AM. (2011). Uptake of picophytoplankton, bacterioplankton and virioplankton by a fringing coral reef community (Ningaloo Reef, Australia). Coral Reefs 30(3):555-567. http://link.springer.com/article/10.1007%2Fs00338-011-0777-8#

Pattiaratchi CB, Hollings B, Woo M & Welhena T. 2011. Dense shelf water formation along the south-west Australian inner shelf. Geophysical Research Letters, 38, L10609, doi: 10.1029/2011GL046816. http://onlinelibrary.wiley.com/doi/10.1029/2011GL046816/abstract

Pattiaratchi, C., B. Hollings, M. Woo and T. Welhena (2011). Dense shelf water formation along the south‐west Australian inner shelf. Geophysical Research Letters 38: L10609. http://onlinelibrary.wiley.com/doi/10.1029/2011GL046816/abstract

Pearce, A., D. Slawinski, M. Feng, B. Hutchins, P. Fearns, Modelling the potential transport of tropical fish larvae in the Leeuwin Current. Continental Shelf Research (2011), 31: 2018-2040. http://www.sciencedirect.com/science/article/pii/S0278434311003268

Rivers, D.O., G.A.Kendrick and D.I. Walker (2011). Microsites play an important role for seedling survival in the seagrass Amphibolis antarctica. Journal of Experimental Marine Biology and Ecology 401: 29-35. http://www.sciencedirect.com/science/article/pii/S0022098111001055

Rogers, A. 2011. Is Choice Modelling Really Necessary? Public versus expert values for marine reserves in Western Australia, Melbourne. Australian Agricultural and Resource Economics Society 55th Annual Conference, Melbourne. http://ageconsearch.umn.edu/handle/100704

Smale, D. A., Kendrick, G. A., and Wernberg, T. (2011). Subtidal macroalgal richness, diversity and turnover, at multiple spatial scales, along the southwestern Australian coastline. Estuarine, Coastal and Shelf Science 91: 224-231. http://www.sciencedirect.com/science/article/pii/S0272771410003641

Smale, D. A., Langlois, T., Kendrick, G. A., Meeuwig, J. Harvey, E. S. (2011) From fronds to fish: the use of indicators for ecological monitoring in marine benthic ecosystems, with case studies from temperate Western Australia. Reviews in Fish Biology and Fisheries 21(3): 311-337. http://link.springer.com/article/10.1007%2Fs11160-010-9173-7#

Smale, D. A., Wernberg, T., Peck, L. S. and Barnes, David. K. A. (2011) Turning on the heat: ecological response to simulated warming in the sea. PlosOne, 6 (1): e16050 http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0016050

Smale, D. A., Wernberg, T., Vance, T. (2011) Community development on temperate subtidal reefs: the influences of wave energy and the stochastic recruitment of a dominant kelp. Marine Biology 158: 1757-1766. http://link.springer.com/article/10.1007%2Fs00227-011-1689-4#page-1

Sun, C., M. Feng, R. Matear, M. Chamberlain, P. Craig, K. Ridgway, and A. Schiller (2011). Marine downscaling of a future climate scenario for Australian boundary currents, J. Clim., 25: 2947–2962. http://journals.ametsoc.org/doi/abs/10.1175/JCLI-D-11-00159.1

Symonds, G., L. Zhong and N. Mortimer (2011). Effects of wave exposure on circulation in a temperate reef environment. Journal of Geophysical Research 116: C09010. http://onlinelibrary.wiley.com/doi/10.1029/2010JC006658/abstract

Taebi S, Lowe R, Pattiaratchi CB, Ivey G & Symonds G. 2011. The response of the wave-driven circulation at Ningaloo Reef, Western Australia, to a rise in mean sea level. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://gfd.sese.uwa.edu.au/wp-content/uploads/2012/06/495_Taebi_CP.pdf

Taebi S, Lowe RJ, Pattiaratchi C, Ivey G, Symonds G and Brinkman RM (2011) Nearshore circulation in a tropical fringing reef system. Journal of Geophysical Research 116:C02016. http://onlinelibrary.wiley.com/doi/10.1029/2010JC006439/abstract

Taebi S, Lowe RJ, Pattiaratchi CB, Ivey GN & Symonds G. 2011. Modelling nearshore circulation in a fringing reef system: Ningaloo Reef, Australia. Proceedings of the eleventh international coastal symposium, Szczecin, Poland, 9–14 May, Journal of Coastal Research, special issue 64, pp. 1200–1203. http://www.ics2011.pl/artic/SP64_1200-1203_S.Taebi.pdf

Taebi S, Lowe RJ, Pattiaratchi CB, Ivey GN, Symonds G & Brinkman R. 2011. Nearshore circulation in a tropical fringing reef system. Journal of Geophysical Research: Oceans, 116, C02016, doi: 10.1029/2010JC006439. http://onlinelibrary.wiley.com/doi/10.1029/2010JC006439/abstract

Taebi, S, Lowe, R, Pattiaratchi, C, Ivey, G, Symonds, G (2011). Modelling nearshore circulation in a fringing reef system: Ningaloo Reef, Australia. Journal of Coastal Research, Special Issue 64: 1200-1204. http://www.ics2011.pl/artic/SP64_1200-1203_S.Taebi.pdf

Thompson, P.A., K. Wild-Allen, M. Lourey, C. Rousseaux, A.M. Waite, M. Feng and L.E. Beckley (2011). Nutrients in an oligotrophic boundary current: Evidence of a new role for the Leeuwin Current. Progress in Oceanography, 91(4): 345-359 http://www.sciencedirect.com/science/article/pii/S0079661111000267

Thompson, P.A., P. Bonham, A.M. Waite, L.A. Clementson, N. Cherukuru, C. Hassler and M.A. Doblin (2011). Contrasting oceanographic conditions and phytoplankton communities on the east and west coasts of Australia. Deep-Sea Research II 58: 645–663. http://www.sciencedirect.com/science/article/pii/S096706451000281X

Valesini, F.J., Hallett, C.S., Cottingham, A., Hesp, S.A., Hoeksema, S.D., Hall, N.G., Linke, T.E., Buckland, A.J. (2011). Development of biotic indices for establishing and monitoring ecosystem health of the Swan-Canning Estuary. Final Report to the Swan River Trust, Department of Water, Department of Fisheries. Murdoch University. http://researchrepository.murdoch.edu.au/7726/

Verges A, Hyndes G, Vanderklift M. 2011. Trophic effects through herbivory at Ningaloo Reef. Final Report submitted to WAMSI. 129pp. http://ningaloo-atlas.org.au/content/wamsi-3.2.2c-final-report-trophic-effects-through-he

Verges A, Vanderklift MA, Doropoulos C, Hyndes, GA, (2011). Spatial patterns in herbivory on a coral reef are influenced by structural complexity by not by algal traits. PLoS ONE 6:1-12. e17115. http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0017115

Welhena T, Pattiaratchi CB & Feng M. 2011. Dense water formation and cross-shelf exchange on the Rottnest continental shelf in south-western Australia. Proceedings of Coasts and Ports 2011, Engineers Australia, Perth, 28–30 September. http://www.researchgate.net/publication/235223505_Dense_water_formation_and_cross-shelf_exchange_on_the_Rottnest_continental_shelf_in_south-western_Australia

Weller, E., David Holliday, Ming Feng, Lynnath Beckley, and Peter Thompson, A. (2011). A continental shelf scale examination of the Leeuwin Current off Western Australia during the austral autumn-winter, Continental Shelf Research, 31: 1858-1868 http://researchrepository.murdoch.edu.au/5845/

Weller, E., M. Feng, H. Hendon, J. Ma, S-P Xie, and N. Caputi (2011). Interannual variations of wind regimes off the subtropical Western Australia coast and their potential impacts on marine environment. J. Clim. http://journals.ametsoc.org/doi/full/10.1175/JCLI-D-11-00324.1 .

Wernberg, T., Russell, B. D., Moore, P. J., Ling, S. D., Smale, D. A., Campbell, A., Coleman, M., Steinberg, P. D., Kendrick, G. A., Connell, S. D. (2011) Impacts of climate change in a global hotspot for temperate marine biodiversity and ocean warming. Journal of Experimental Marine Biology and Ecology doi:10.1016/j.jembe.2011.02.021 http://www.sciencedirect.com/science/article/pii/S0022098111000694

Xue, Y., M.A. Balmaseda, T. Boyer, N. Ferry, S. Good, I. Ishikawa, M. Rienecker, T. Rosati, Y. Yin, A. Kumar, 2011: Comparative analysis of upper ocean heat content variability from ensemble operational ocean analyses. U.S. CLIVAR Variations, 9(1):7-10. http://journals.ametsoc.org/doi/abs/10.1175/JCLI-D-11-00542.1

Yin, Y., O. Alves, and P. R. Oke (2011). An ensemble ocean data assimilation system for seasonal prediction. Mon. Weather Review, 139:786-808. http://journals.ametsoc.org/doi/abs/10.1175/2010MWR3419.1

 

2010

Feng, M., Slawinski, D., Beckley, and Keesing, J.K. (2010) Retention and dispersal of shelf waters influenced by interactions of ocean current and coastal geography. Marine and Freshwater Research 61: 1259-1267. http://www.publish.csiro.au/paper/MF09275.htm

Haigh ID, & Pattiaratchi CB 2009.  Haigh ID & Pattiaratchi CB. 2010. Estimating 21st century changes in extreme sea levels around Western Australia. Proceedings of the seventeenth national conference of the Australian Meteorological and Oceanographic Society, IOP Conference Series: Earth and Environmental Science, IOP Publishing Ltd, Canberra, Australian Capital Territory, 27–29 January 2009, vol. 11, doi: 10.1088/1755-1315/11/1/012033. http://iopscience.iop.org/1755-1315/11/1/012033

Hollings B, Pattiaratchi CB, Woo M & Hanson CE. 2010. Sustained oceanographic observations around Australia using autonomous ocean gliders. Proceedings of the Oceans 2010 IEEE conference, Crown Publishing, Sydney, 24–27 May, pp. 1–4. http://www.researchgate.net/publication/224183008_Sustained_oceanographic_observations_around_Australia_using_autonomous_Ocean_Gliders

Lowe RJ, Hart C & Pattiaratchi CB. 2010. Morphological constraints to wave‐driven circulation in coastal reef–lagoon systems: a numerical study. Journal of Geophysical Research: Oceans, 115, C09021, doi: 10.1029/2009JC005753. http://onlinelibrary.wiley.com/doi/10.1029/2009JC005753/full

Pattiaratchi CB, Hollings B, Woo M & Hanson C 2010. Oceanographic observations of the Australian continental shelf and slope waters using autonomous ocean gliders. In J Hall, DE Harrison & D Stammer (eds), Proceedings of OceanObs’09: sustained ocean observations and information for society conference, ESA publication WPP-306, Venice, 21–25 September 2009, doi: 10.5270/OceanObs09. http://www.oceanobs09.net/proceedings/ac/FCXNL-09A02-1661165-1-ac4a25.pdf

Smale, D. A., Kendrick, G. A., and Wernberg, T. (2010) Assemblage turnover and taxonomic sufficiency of subtidal macroalgae at multiple spatial scales. Journal of Experimental Marine Biology and Ecology doi:10.1016/j.jembe.2009.11.013 http://www.sciencedirect.com/science/article/pii/S0022098109004894